lect1p1_intro.pdf: Data, networks and models
lect1p2_ModellingWithDifferentialEquations.pdf: Introduction to modelling with differential equations
lect2p1_MultiVariableModels.pdf: Multi-variable models
lect2p2_parameters.pdf: Parameter estimation and sensitivity analysis (Monk/Owen)
Single-variable models (using MATLAB). The worksheet can be found here: prac-matlab-odes.pdf.
The worksheet, solutions and a number of MATLAB files can be found in this archive: prac-matlab-odes.zip
Multi-variable models (using MATLAB). This practical considers a multicomponent negative feedback loop which oscillates when feedback is regulated by a dimer of transcription factors. The worksheet can be found here: prac-multi-odes.pdf.
The worksheet together with a number of MATLAB files can be found in this archive: prac-multi-odes.zip
Parameter estimation and sensitivity (using MATLAB). The worksheet can be found here: prac-parameters.pdf.
The worksheet together with MATLAB and data files can be found in this archive: prac-parameters.zip